BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008F02LP1|AL425890
(806 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1102 1598 0.0
>3x_Contig1102
Length = 3442
Score = 1598 bits (806), Expect = 0.0
Identities = 806/806 (100%)
Strand = Plus / Plus
Query: 1 agactagaaaattgccctataataggacaatgctttcagacacctgtttttgagttgcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1833 agactagaaaattgccctataataggacaatgctttcagacacctgtttttgagttgcgt 1892
Query: 61 taagactgttaaacgatagtaattcctttagaataactgtttcaaagtaaaggtatacga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1893 taagactgttaaacgatagtaattcctttagaataactgtttcaaagtaaaggtatacga 1952
Query: 121 acgggaatatactgcggttatgtacaggatacgtaccggcaatctagtgcaaaggttgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1953 acgggaatatactgcggttatgtacaggatacgtaccggcaatctagtgcaaaggttgaa 2012
Query: 181 tctggcaagaaattatactcaaaaaagtacgaaacaaactagaaggaccggactgaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2013 tctggcaagaaattatactcaaaaaagtacgaaacaaactagaaggaccggactgaaaat 2072
Query: 241 tctcttgtacttttcgataccgtacaccggctatgcattatatgtattcggcagcacaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2073 tctcttgtacttttcgataccgtacaccggctatgcattatatgtattcggcagcacaaa 2132
Query: 301 ctatgaaattacgagaagagagcggcagcttgccgacaaagatgatctagaattcaagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2133 ctatgaaattacgagaagagagcggcagcttgccgacaaagatgatctagaattcaagag 2192
Query: 361 cactcttgtgaaatactctccgttccaggttttgggacggttcgaaaaccctttcaatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2193 cactcttgtgaaatactctccgttccaggttttgggacggttcgaaaaccctttcaatga 2252
Query: 421 atacagaattcaaactgtatttgagttctttttcaatcgagtcgttgaagtgttccaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2253 atacagaattcaaactgtatttgagttctttttcaatcgagtcgttgaagtgttccaaag 2312
Query: 481 aaatagaggtggtctaccgagatcgaaagagcaaatggacgagttgatgcctattcataa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2313 aaatagaggtggtctaccgagatcgaaagagcaaatggacgagttgatgcctattcataa 2372
Query: 541 accgacatgggtaaccaagggagttttggataactctcataatgaaattgaagtcgagat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2373 accgacatgggtaaccaagggagttttggataactctcataatgaaattgaagtcgagat 2432
Query: 601 taaaccattttcttcagacgaaaaagaagtgaacaccgaacctgtcaaacggttatattg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2433 taaaccattttcttcagacgaaaaagaagtgaacaccgaacctgtcaaacggttatattg 2492
Query: 661 cacatggctaggtcaatcatgcagcgtgattatattggataaattgaagatacttacgga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2493 cacatggctaggtcaatcatgcagcgtgattatattggataaattgaagatacttacgga 2552
Query: 721 tccaatgttttcgaaacatttaatacatcccacctttggcccacaacgaatcactgatat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2553 tccaatgttttcgaaacatttaatacatcccacctttggcccacaacgaatcactgatat 2612
Query: 781 gccagcgaaaatcgaagatgtaccga 806
||||||||||||||||||||||||||
Sbjct: 2613 gccagcgaaaatcgaagatgtaccga 2638
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5715
Number of Sequences: 1807
Number of extensions: 5715
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 806
length of database: 10,358,551
effective HSP length: 16
effective length of query: 790
effective length of database: 10,329,639
effective search space: 8160414810
effective search space used: 8160414810
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)